UniProt data
UniProt name: LRTM1_HUMAN (Q9HBL6)
Gene name: LRTM1; ORFNames=HT017
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Transmembrane domains:
- 289-309, 21 AA, Helical. {ECO:0000255}.
Sequence: 345 AA
10 20 30 40 50 60
MKGELLLFSS VIVLLQVVCS CPDKCYCQSS TNFVDCSQQG LAEIPSHLPP QTRTLHLQDN
70 80 90 100 110 120
QIHHLPAFAF RSVPWLMTLN LSNNSLSNLA PGAFHGLQHL QVLNLTQNSL LSLESRLFHS
130 140 150 160 170 180
LPQLRELDLS SNNISHLPTS LGETWENLTI LAVQQNQLQQ LDRALLESMP SVRLLLLKDN
190 200 210 220 230 240
LWKCNCHLLG LKLWLEKFVY KGGLTDGIIC ESPDTWKGKD LLRIPHELYQ PCPLPAPDPV
250 260 270 280 290 300
SSQAQWPGSA HGVVLRPPEN HNAGERELLE CELKPKPRPA NLRHAIATVI ITGVVCGIVC
310 320 330 340
LMMLAAAIYG CTYAAITAQY HGGPLAQTND PGKVEEKERF DSSPA
CATM prediction
The sequence of LRTM1_HUMAN returned 2 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 290 300 310 | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | IATVIITGVVCGIVCLMMLAAAIYGCT | 6.9 | -43.0° | 0.0 | 34.0 | -13.5 |
| Model 2 | IATVIITGVVCGIVCLMMLAAAIYGCT | 6.5 | -55.4° | 4.9 | 53.2 | -5.2 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 307, ALA, HA | A, 306, ALA, O | 2.99Å |
| A, 307, ALA, HA | B, 306, ALA, O | 2.99Å |
