GREB1-like protein

UniProt data

UniProt name: GRB1L_HUMAN (Q9C091)

Gene name: GREB1L; Synonyms=C18orf6, KIAA1772

Organism: Homo sapiens (Human).

Function:

Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.

Transmembrane domains:

  1. 1843-1862, 20 AA, Helical. {ECO:0000255}.

Sequence: 1923 AA

10 20 30 40 50 60 MGNSYAGQLK SARFEEALHN SIEASLRCSS VVPRPIFSQL YLDPDQHPFS SADVKPKVED 70 80 90 100 110 120 LDKDLVNRYT QNGSLDFSNN LTVNEMEDDE DDEEMSDSNS PPIPYSQKPA PEGSCTTDGF 130 140 150 160 170 180 CQAGKDLRLV SLCMEQIDIP AGFLLVGAKS PNLPEHILVC AVDKRFLPDD HGKNALLGFS 190 200 210 220 230 240 GNCIGCGERG FRYFTEFSNH INLKLTTQPK KQKHLKYYLV RSSQGVLSKG PLICWKECRS 250 260 270 280 290 300 RQSSASCHSI KPSSSVSSTV TPENGTTNGY KSGFTQTDAA NGNSSHGGKG SASSSTPAHT 310 320 330 340 350 360 GNYSLSPRPS YASGDQATMF ISGPPKKRHR GWYPGSPLPQ PGLVVPVPTV RPLSRTEPLL 370 380 390 400 410 420 SAPVPQTPLT GILQPRPIPA GETVIVPENL LSNSGVRPVI LIGYGTLPYF YGNVGDIVVS 430 440 450 460 470 480 PLLVNCYKIP QLENKDLEKL GLTGSQFLSV ENMILLTIQY LVRLGPDQVP LREEFEQIML 490 500 510 520 530 540 KAMQEFTLRE RALQIGAQCV PVSPGQLPWL ARLIASVSQD LVHVVVTQNS LAEGISETLR 550 560 570 580 590 600 TLSEMRHYQR LPDYVVVICA SKIRGNEFCV VVLGQHQSRA LAESMLTTSE FLKEISYELI 610 620 630 640 650 660 TGKVSFLASH FKTTSLGDDL DKLLEKMQQR RGDSVVTPFD GDLNECVSPQ EAAAMIPTQN 670 680 690 700 710 720 LDLDNETFHI YQPQLTVARK LLSQVCAIAD SGSQSLDLGH FSKVDFIIIV PRSEVLVQQT 730 740 750 760 770 780 LQRIRQSGVL VDLGLEENGT AHQRAEKYVV RLDNEIQTKF EVFMRRVKQN PYTLFVLVHD 790 800 810 820 830 840 NSHVELTSVI SGSLSHSEPS HGLADRVINC REVLEAFNLL VLQVSSFPYT LQTQQSRISS 850 860 870 880 890 900 SNEVHWIQLD TGEDVGCEEK LYFGLSEYSK SLQWGITSPL LRCDETFEKM VNTLLERYPR 910 920 930 940 950 960 LHSMVVRCYL LIQQYSEALM ALTTMASLRD HSTPETLSIM DDLISSPGKN KSGRGHMLII 970 980 990 1000 1010 1020 RVPSVQLAML AKERLQEVRD KLGLQYRFEI ILGNPATELS VATHFVARLK SWRGNEPEEW 1030 1040 1050 1060 1070 1080 IPRTYQDLDG LPCIVILTGK DPLGETFPRS LKYCDLRLID SSYLTRTALE QEVGLACCYV 1090 1100 1110 1120 1130 1140 SKEVIRGPTV ALDLSGKEQE RAAVSENDSD ELLIDLERPQ SNSSAVTGTS GSIMENGVSS 1150 1160 1170 1180 1190 1200 SSTADKSQKQ SLTPSFQSPA TSLGLDEGVS ASSAGAGAGE TLKQECDSLG PQMASSTTSK 1210 1220 1230 1240 1250 1260 PSSSSSGPRT LPWPGQPIRG CRGPQAALPP VVILSKAAYS LLGSQKSGKL PSSSSLLPHA 1270 1280 1290 1300 1310 1320 DVAWVSSLRP LLNKDMSSEE QSLYYRQWTL ARQHHADYSN QLDPASGTRN FHPRRLLLTG 1330 1340 1350 1360 1370 1380 PPQVGKTGSY LQFLRILFRM LIRLLEVDVY DEEEINTDHN ESSEVSQSEG EPWPDIESFS 1390 1400 1410 1420 1430 1440 KMPFDVSVHD PKYSLMSLVY TEKLAGVKQE VIKESKVEEP RKRETVSIML TKYAAYNTFH 1450 1460 1470 1480 1490 1500 HCEQCRQYMD FTSASQMSDS TLHAFTFSSS MLGEEVQLYF IIPKSKESHF VFSKQGKHLE 1510 1520 1530 1540 1550 1560 SMRLPLVSDK NLNAVKSPIF TPSSGRHEHG LLNLFHAMEG ISHLHLLVVK EYEMPLYRKY 1570 1580 1590 1600 1610 1620 WPNHIMLVLP GMFNNAGVGA ARFLIKELSY HNLELERNRL EELGIKRQCV WPFIVMMDDS 1630 1640 1650 1660 1670 1680 CVLWNIHSVQ EPSSQPMEVG VSSKNVSLKT VLQHIEATPK IVHYAILGIQ KWSSKLTSQS 1690 1700 1710 1720 1730 1740 LKAPFSRCHV HDFILLNTDL TQNVQYDFNR YFCEDADFNL RTNSSGLLIC RFNNFSLMKK 1750 1760 1770 1780 1790 1800 HVQVGGQRDF IIKPKIMVSE SLAPILPLQY ICAPDSEHTL LAAPAQFLLE KFLQHASYKL 1810 1820 1830 1840 1850 1860 FPKAIHNFRS PVLAIDCYLN IGPEVAICYI SSRPHSSNVN CEGVFFSGLL LYLCDSFVGA 1870 1880 1890 1900 1910 1920 DLKKFKFLKG ATLCVICQDR SSLRQTIVRL ELEDEWQFRL RDEFQTANSS DDKPLYFLTG RHV

CATM prediction

The sequence of GRB1L_HUMAN returned 1 potential models

The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.

# Sequence and interface d θ Z' ω' Score
  1840      1850      1860  
|    +    |    +    |    +
(Å) (°) (Å) (°)  
NCEGVFFSGLLLYLCDSFVGADLKKF 6.5 -46.9° 2.2 44.9 -35.9

Click on the model number to visualize its details below.

MODEL 1 DETAILS

Precited structure:


Click on the image to enlarge

Download model 1 structure: PDB, PyMOL session

List of hydrogen bonds:

Donor Acceptor Distance
B, 1852, TYR, HA A, 1855, ASP, OD2 2.83Å
B, 1856, SER, HA A, 1855, ASP, O 2.66Å
B, 1859, GLY, HA1 A, 1856, SER, O 2.48Å
B, 1860, ALA, HA A, 1859, GLY, O 3.17Å
A, 1852, TYR, HA B, 1855, ASP, OD2 2.83Å
A, 1856, SER, HA B, 1855, ASP, O 2.66Å
A, 1859, GLY, HA1 B, 1856, SER, O 2.48Å
A, 1860, ALA, HA B, 1859, GLY, O 3.17Å