UniProt data
UniProt name: SMIM2_HUMAN (Q9BVW6)
Gene name: SMIM2; Synonyms=C13orf44
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 21-43, 23 AA, Helical. {ECO:0000255}.
Sequence: 85 AA
10 20 30 40 50 60
MEAGERIDAS QLPHRVLETR GHAISILFGF WTSFICDTYI VLAWISKIKG SPDVSASSDE
70 80
PYARIQQSRR QCHAEEDQSQ VPEAG
CATM prediction
The sequence of SMIM2_HUMAN returned 1 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 20 30 40 | + | + | + |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | ETRGHAISILFGFWTSFICDTYIVLAWIS | 7.1 | -43.7° | 1.8 | 45.0 | -23.8 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 22, HSE, HA | A, 22, HSE, ND1 | 3.35Å |
| B, 25, SER, HG1 | A, 22, HSE, ND1 | 1.81Å |
| B, 26, ILE, HA | A, 25, SER, O | 3.30Å |
| B, 29, GLY, HA1 | A, 26, ILE, O | 3.09Å |
| B, 30, PHE, HA | A, 29, GLY, O | 3.38Å |
| B, 33, SER, HG1 | A, 30, PHE, O | 2.49Å |
| A, 22, HSE, HA | B, 22, HSE, ND1 | 3.40Å |
| A, 26, ILE, HA | B, 25, SER, O | 3.30Å |
| A, 29, GLY, HA1 | B, 26, ILE, O | 3.09Å |
| A, 30, PHE, HA | B, 29, GLY, O | 3.38Å |
| A, 33, SER, HG1 | B, 30, PHE, O | 2.49Å |