UniProt data
UniProt name: CQ080_HUMAN (Q9BSJ5)
Gene name: C17orf80; ORFNames=HLC8, MIG3
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 553-573, 21 AA, Helical. {ECO:0000255}.
Sequence: 609 AA
10 20 30 40 50 60
MSDNPPRMEV CPYCKKPFKR LKSHLPYCKM IGPTIPTDQK VYQSKPATLP RAKKMKGPIK
70 80 90 100 110 120
DLIKAKGKEL ETENEERNSK LVVDKPEQTV KTFPLPAVGL ERAATTKADK DIKNPIQPSF
130 140 150 160 170 180
KMLKNTKPMT TFQEETKAQF YASEKTSPKR ELAKDLPKSG ESRCNPSEAG ASLLVGSIEP
190 200 210 220 230 240
SLSNQDRKYS STLPNDVQTT SGDLKLDKID PQRQELLVKL LDVPTGDCHI SPKNVSDGVK
250 260 270 280 290 300
RVRTLLSNER DSKGRDHLSG VPTDVTVTET PEKNTESLIL SLKMSSLGKI QVMEKQEKGL
310 320 330 340 350 360
TLGVETCGSK GNAEKSMSAT EKQERTVMSH GCENFNTRDS VTGKESQGER PHLSLFIPRE
370 380 390 400 410 420
TTYQFHSVSQ SSSQSLASLA TTFLQEKKAE AQNHHCVPDV KALMESPEGQ LSLEPKSDSQ
430 440 450 460 470 480
FQASHTGCQS PLCSAQRHTP QSPFTNHAAA AGRKTLRSCM GLEWFPELYP GYLGLGVLPG
490 500 510 520 530 540
KPQCWNAMTQ KPQLISPQGE RLSQVSLLER SSTHIRSLEP PAGLTTSNFS LMRLLGAVQK
550 560 570 580 590 600
GWIRCNTTIR KSGFGGITML FTGYFVLCCS WSFRRLKKLC RPLPWKSTVP PCIGVAKTTG
DCRSKTCLD
CATM prediction
The sequence of CQ080_HUMAN returned 2 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 550 560 570 | + | + | + |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | RKSGFGGITMLFTGYFVLCCSWSFRRL | 7.1 | -42.0° | 1.9 | 33.0 | -12.8 |
| Model 2 | RKSGFGGITMLFTGYFVLCCSWSFRRL | 6.9 | -53.0° | 3.1 | 34.0 | -5.1 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 556, GLY, HA2 | A, 555, GLY, O | 3.43Å |
| A, 556, GLY, HA2 | B, 555, GLY, O | 3.43Å |
