UniProt data
UniProt name: SYT15_HUMAN (Q9BQS2)
Gene name: SYT15
Organism: Homo sapiens (Human).
Function: May be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues. {ECO:0000250}.
Subcellular location: Isoform 4: Cell membrane {ECO:0000250}; Single-pass type III membrane protein {ECO:0000250}.
Transmembrane domains:
- 5-29, 25 AA, Helical; Signal-anchor for type III membrane protein. {ECO:0000255}.
Sequence: 421 AA
CATM prediction
The sequence of SYT15_HUMAN returned 4 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 10 20 30 + | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | AEQLALVIGGTIGGLLLLLLIGASCCLWRRF | 6.3 | -51.1° | 4.4 | 40.0 | -15.0 |
| Model 2 | AEQLALVIGGTIGGLLLLLLIGASCCLWRRF | 7.0 | -29.3° | 2.5 | 60.4 | -9.2 |
| Model 3 | AEQLALVIGGTIGGLLLLLLIGASCCLWRRF | 7.2 | -53.4° | 1.9 | 45.0 | -6.4 |
| Model 4 | AEQLALVIGGTIGGLLLLLLIGASCCLWRRF | 7.1 | -39.9° | 4.5 | 43.9 | -4.9 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 10, GLY, HA1 | A, 7, LEU, O | 3.23Å |
| B, 11, GLY, HA2 | A, 10, GLY, O | 2.29Å |
| B, 11, GLY, HA2 | A, 11, GLY, O | 3.47Å |
| B, 14, GLY, HA1 | A, 11, GLY, O | 2.58Å |
| A, 10, GLY, HA1 | B, 7, LEU, O | 3.23Å |
| A, 11, GLY, HA2 | B, 10, GLY, O | 2.29Å |
| A, 11, GLY, HA2 | B, 11, GLY, O | 3.47Å |
| A, 14, GLY, HA1 | B, 11, GLY, O | 2.58Å |
