UniProt data
UniProt name: CQ062_HUMAN (Q9BQA9)
Gene name: C17orf62
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 20-42, 23 AA, Helical. {ECO:0000255}.
Sequence: 187 AA
10 20 30 40 50 60
MYLQVETRTS SRLHLKRAPG IRSWSLLVGI LSIGLAAAYY SGDSLGWKLF YVTGCLFVAV
70 80 90 100 110 120
QNLEDWEEAI FDKSTGKVVL KTFSLYKKLL TLFRAGHDQV VVLLHDVRDV SVEEEKVRYF
130 140 150 160 170 180
GKGYMVVLRL ATGFSHPLTQ SAVMGHRSDV EAIAKLITSF LELHCLESPT ELSQSSDSEA
GDPASQS
CATM prediction
The sequence of CQ062_HUMAN returned 1 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 20 30 40 | + | + | + |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | RAAGIRSWSLLVGILSIGLAAAYYSGDSL | 7.4 | -41.9° | 1.3 | 45.0 | -17.8 |
| Prolines* | RAPGIRSWSLLVGILSIGLAAAYYSGDSL |
* Note: this sequence contains Pro residues. CATM substituted them with Ala during the modeling. The positions are marked.
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 34, GLY, HA1 | A, 31, LEU, O | 3.39Å |
| B, 35, LEU, HA | A, 34, GLY, O | 3.47Å |
| B, 39, TYR, HH | A, 41, SER, OG | 2.39Å |
| A, 34, GLY, HA1 | B, 31, LEU, O | 3.39Å |
| A, 35, LEU, HA | B, 34, GLY, O | 3.47Å |
| A, 39, TYR, HH | B, 41, SER, OG | 2.39Å |