UniProt data
UniProt name: CH049_HUMAN (Q96NF6)
Gene name: C8orf49
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 110-130, 21 AA, Helical. {ECO:0000255}.
Sequence: 230 AA
10 20 30 40 50 60
MEKPRLYQKY KISRVWWRLP VIPATREAED NRLNPEGRGC GEPRSRHCTP AWTTTAKLHL
70 80 90 100 110 120
KTIISLQPLN MYQMEPGVGS IRTSPALQSP PALTRGPSAW DTAIRKALSF GVGLGVLVLV
130 140 150 160 170 180
CLFYHFVTLA PILQFASLPC LLEAGAQMSR HPVTTQVCIM PARLSLGSGI SRNLLRLSVC
190 200 210 220
HFTLLLPFRS LRPCPLSSRD MVLSYELWLL CDFYIAPPDS SGSGICKKAI
CATM prediction
The sequence of CH049_HUMAN returned 2 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 110 120 130 | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | ALSFGVGLGVLVLVCLFYHFVTLAAIL | 7.0 | -32.0° | 5.8 | 44.0 | -12.5 |
| Model 2 | ALSFGVGLGVLVLVCLFYHFVTLAAIL | 7.4 | -50.0° | 2.9 | 47.0 | -7.9 |
| Prolines* | ALSFGVGLGVLVLVCLFYHFVTLAPIL |
* Note: this sequence contains Pro residues. CATM substituted them with Ala during the modeling. The positions are marked.
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
