UniProt data
UniProt name: SMIM8_HUMAN (Q96KF7)
Gene name: SMIM8; Synonyms=C6orf162; ORFNames=DC18
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 48-70, 23 AA, Helical. {ECO:0000255}.
Sequence: 97 AA
CATM prediction
The sequence of SMIM8_HUMAN returned 1 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 50 60 70 + | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | ANKAVMAFGLVTLSLCVAYIGYLHAIQEN | 7.3 | -43.9° | 1.8 | 45.2 | -16.2 |
| Prolines* | PNKPVMAFGLVTLSLCVAYIGYLHAIQEN |
* Note: this sequence contains Pro residues. CATM substituted them with Ala during the modeling. The positions are marked.
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 62, ALA, HA | A, 61, VAL, O | 3.46Å |
| B, 65, GLY, HA1 | A, 62, ALA, O | 3.22Å |
| B, 66, TYR, HA | A, 65, GLY, O | 3.40Å |
| B, 69, ALA, HA | A, 66, TYR, OH | 3.12Å |
| A, 62, ALA, HA | B, 61, VAL, O | 3.46Å |
| A, 65, GLY, HA1 | B, 62, ALA, O | 3.22Å |
| A, 66, TYR, HA | B, 65, GLY, O | 3.40Å |
| A, 69, ALA, HA | B, 66, TYR, OH | 3.12Å |