UniProt data
UniProt name: TMM52_HUMAN (Q8NDY8)
Gene name: TMEM52; ORFNames=UNQ3048/PRO9864
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 56-76, 21 AA, Helical. {ECO:0000255}.
Sequence: 209 AA
10 20 30 40 50 60
MARGPLAARG LRLLLPLLPL LPLLPLPQVA LGFADGSCDP SDQCPPQARW SSLWHVGLIL
70 80 90 100 110 120
LAVLLLLLCG VTAGCVRFCC LRKQAQAQPH LPPARQPCDV AVIPMDSDSP VHSTVTSYSS
130 140 150 160 170 180
VQYPLGMRLP LPFGELDLDS MAPPAYSLYT PEPPPSYDEA VKMAKPREEG PALSQKPSPL
190 200
LGASGLETTP VPQESGPNTQ LPPCSPGAP
CATM prediction
The sequence of TMM52_HUMAN returned 1 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 60 70 + | + | + |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | LWHVGLILLAVLLLLLCGVTAGCVRFC | 6.9 | -54.6° | 0.9 | 50.0 | -13.2 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 70, GLY, HA1 | A, 67, LEU, O | 2.98Å |
| B, 71, VAL, HA | A, 70, GLY, O | 3.18Å |
| A, 70, GLY, HA1 | B, 67, LEU, O | 2.98Å |
| A, 71, VAL, HA | B, 70, GLY, O | 3.18Å |