UniProt data
UniProt name: CC020_HUMAN (Q8ND61)
Gene name: C3orf20
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 778-798, 21 AA, Helical. {ECO:0000255}.
Sequence: 904 AA
10 20 30 40 50 60
MSYIKSNLEL YQQYTAMAPK LLARISKLLM ICQNAGISVP KGIRNIFEFT WEELISDPSV
70 80 90 100 110 120
PTPSDILGLE VSFGAPLVVL MEPTFVQVPT LKKPLPPPPP APPRPVLLAT TGAAKRSTLS
130 140 150 160 170 180
PTMARQVRTH QETLNRFQQQ SIHLLTELLR LKMKAMVESM SVGANPLDIT RRFVEASQLL
190 200 210 220 230 240
HLNAKEMAFN CLISTAGRSG YSSGQLWKES LANMSAIGVN SPYQLIYHSS TACLSFSLSA
250 260 270 280 290 300
GKEAKKKIGK SRTTEDVSMP PLHRGVGTPA NSLEFSDPCP EAREKLQELC RHIEAERATW
310 320 330 340 350 360
KGRNISYPMI LRNYKAKMPS HLMLARKGDS QTPGLHYPPT AGAQTLSPTS HPSSANHHFS
370 380 390 400 410 420
QHCQEGKAPK KAFKFHYTFY DGSSFVYYPS GNVAVCQIPT CCRGRTITCL FNDIPGFSLL
430 440 450 460 470 480
ALFNTEGQGC VHYNLKTSCP YVLILDEEGG TTNDQQGYVV HKWSWTSRTE TLLSLEYKVN
490 500 510 520 530 540
EEMKLKVLGQ DSITVTFTSL NETVTLTVSA NNCPHGMAYD KRLNRRISNM DDKVYKMSRA
550 560 570 580 590 600
LAEIKKRFQK TVTQFINSIL LAAGLFTIEY PTKKEEEEFV RFKMRSRTHP ERLPKLSLYS
610 620 630 640 650 660
GESLLRSQSG HLESSIAETL KDEPESAPVS PVRKTTKIHT KAKVTSRGKA REGRSPTRWA
670 680 690 700 710 720
ALPSDCPLVL RKLMLKEDTR AGCKCLVKAP LVSDVELERF LLAPRDPSQV LVFGIISSQN
730 740 750 760 770 780
YTSTGQLQWL LNTLYNHQQR GRGSPCIQCR YDSYRLLQYD LDSPLQEDPP LMVKKNSVVQ
790 800 810 820 830 840
GMILMFAGGK LIFGGRVLNG YGLSKQNLLK QIFRSQQDYK MGYFLPDDYK FSVPNSVLSL
850 860 870 880 890 900
EDSESVKKAE SEDIQGSSSS LALEDYVEKE LSLEAEKTRE PEVELHPLSR DSKITSWKKQ
ASKK
CATM prediction
The sequence of CC020_HUMAN returned 3 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 780 790 80 + | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | KNSVVQGMILMFAGGKLIFGGRVLNGY | 7.3 | -48.0° | 3.3 | 34.2 | -21.8 |
| Model 2 | KNSVVQGMILMFAGGKLIFGGRVLNGY | 6.9 | -47.0° | 2.3 | 44.8 | -16.7 |
| Model 3 | KNSVVQGMILMFAGGKLIFGGRVLNGY | 7.0 | -48.8° | 1.8 | 45.0 | -7.8 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 785, MET, HA | A, 784, LEU, O | 3.44Å |
| B, 788, GLY, HA1 | A, 785, MET, O | 3.31Å |
| A, 785, MET, HA | B, 784, LEU, O | 3.44Å |
| A, 788, GLY, HA1 | B, 785, MET, O | 3.31Å |
