RELT-like protein 1

UniProt data

UniProt name: RELL1_HUMAN (Q8IUW5)

Gene name: RELL1; ORFNames=PSEC0162

Organism: Homo sapiens (Human).

Function:

Subcellular location: Cell membrane {ECO:0000269|PubMed:16389068}; Single-pass type I membrane protein {ECO:0000269|PubMed:16389068}.

Transmembrane domains:

  1. 58-78, 21 AA, Helical. {ECO:0000255}.

Sequence: 271 AA

10 20 30 40 50 60 MAPRALPGSA VLAAAVFVGG AVSSPLVAPD NGSSRTLHSR TETTPSPSND TGNGHPEYIA 70 80 90 100 110 120 YALVPVFFIM GLFGVLICHL LKKKGYRCTT EAEQDIEEEK VEKIELNDSV NENSDTVGQI 130 140 150 160 170 180 VHYIMKNEAN ADVLKAMVAD NSLYDPESPV TPSTPGSPPV SPGPLSPGGT PGKHVCGHHL 190 200 210 220 230 240 HTVGGVVERD VCHRCRHKRW HFIKPTNKSR ESRPRRQGEV TVLSVGRFRV TKVEHKSNQK 250 260 270 ERRSLMSVSG AETVNGEVPA TPVKRERSGT E

CATM prediction

The sequence of RELL1_HUMAN returned 1 potential models

The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.

# Sequence and interface d θ Z' ω' Score
       60        70        80
+    |    +    |    +    | 		 (Å) (°) (Å) (°)  
Model 1 HAEYIAYALVAVFFIMGLFGVLICHLL 7.0 -47.0° 2.2 45.1 -33.6
Prolines* HPEYIAYALVPVFFIMGLFGVLICHLL          

* Note: this sequence contains Pro residues. CATM substituted them with Ala during the modeling. The positions are marked.

Click on the model number to visualize its details below.

MODEL 1 DETAILS

Precited structure:


Click on the image to enlarge

Download model 1 structure: PDB, PyMOL session

List of hydrogen bonds:

Donor Acceptor Distance
B, 71, GLY, HA2 A, 70, MET, O 3.11Å
B, 74, GLY, HA1 A, 71, GLY, O 2.92Å
B, 75, VAL, HA A, 74, GLY, O 3.40Å
A, 71, GLY, HA2 B, 70, MET, O 3.11Å
A, 74, GLY, HA1 B, 71, GLY, O 2.92Å
A, 75, VAL, HA B, 74, GLY, O 3.40Å