UniProt data
UniProt name: CONA1_HUMAN (Q86Y22)
Gene name: COL23A1
Organism: Homo sapiens (Human).
Function:
Subcellular location: Cell membrane {ECO:0000250}; Single-pass type II membrane protein {ECO:0000250}; Extracellular side {ECO:0000250}.
Transmembrane domains:
- 35-56, 22 AA, Helical; Signal-anchor for type II membrane protein. {ECO:0000255}.
Sequence: 540 AA
10 20 30 40 50 60
MGPGERAGGG GDAGKGNAAG GGGGGRSATT AGSRAVSALC LLLSVGSAAA CLLLGVQAAA
70 80 90 100 110 120
LQGRVAALEE ERELLRRAGP PGALDAWAEP HLERLLREKL DGLAKIRTAR EAPSECVCPP
130 140 150 160 170 180
GPPGRRGKPG RRGDPGPPGQ SGRDGYPGPL GLDGKPGLPG PKGEKGAPGD FGPRGDQGQD
190 200 210 220 230 240
GAAGPPGPPG PPGARGPPGD TGKDGPRGAQ GPAGPKGEPG QDGEMGPKGP PGPKGEPGVP
250 260 270 280 290 300
GKKGDDGTPS QPGPPGPKGE PGSMGPRGEN GVDGAPGPKG EPGHRGTDGA AGPRGAPGLK
310 320 330 340 350 360
GEQGDTVVID YDGRILDALK GPPGPQGPPG PPGIPGAKGE LGLPGAPGID GEKGPKGQKG
370 380 390 400 410 420
DPGEPGPAGL KGEAGEMGLS GLPGADGLKG EKGESASDSL QESLAQLIVE PGPPGPPGPP
430 440 450 460 470 480
GPMGLQGIQG PKGLDGAKGE KGASGERGPS GLPGPVGPPG LIGLPGTKGE KGRPGEPGLD
490 500 510 520 530
GFPGPRGEKG DRSERGEKGE RGVPGRKGVK GQKGEPGPPG LDQPCPVGPD GLPVPGCWHK
CATM prediction
The sequence of CONA1_HUMAN returned 1 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 40 50 + | + | + |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | GSRAVSALCLLLSVGSAAACLLLGVQAA | 6.9 | -55.0° | 1.5 | 44.7 | -2.4 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 43, LEU, HA | A, 42, LEU, O | 3.48Å |
| B, 46, GLY, HA1 | A, 43, LEU, O | 2.90Å |
| B, 47, SER, HA | A, 46, GLY, O | 3.39Å |
| A, 43, LEU, HA | B, 42, LEU, O | 3.48Å |
| A, 46, GLY, HA1 | B, 43, LEU, O | 2.90Å |
| A, 47, SER, HA | B, 46, GLY, O | 3.39Å |