UniProt data
UniProt name: ARMX6_HUMAN (Q7L4S7)
Gene name: ARMCX6
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 7-27, 21 AA, Helical. {ECO:0000255}.
Sequence: 300 AA
10 20 30 40 50 60
MGRAREVGWM AAGLMIGAGA CYCVYKLTIG RDDSEKLEEE GEEEWDDDQE LDEEEPDIWF
70 80 90 100 110 120
DFETMARPWT EDGDWTEPGA PGGTEDRPSG GGKANRAHPI KQRPFPYEHK NTWSAQNCKN
130 140 150 160 170 180
GSCVLDLSKC LFIQGKLLFA EPKDAGFPFS QDINSHLASL SMARNTSPTP DPTVREALCA
190 200 210 220 230 240
PDNLNASIES QGQIKMYINE VCRETVSRCC NSFLQQAGLN LLISMTVINN MLAKSASDLK
250 260 270 280 290
FPLISEGSGC AKVQVLKPLM GLSEKPVLAG ELVGAQMLFS FMSLFIRNGN REILLETPAP
CATM prediction
The sequence of ARMX6_HUMAN returned 6 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 10 20 3 + | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | AREVGWMAAGLMIGAGACYCVYKLTIG | 6.5 | -41.0° | 0.6 | 43.0 | -47.3 |
| Model 2 | AREVGWMAAGLMIGAGACYCVYKLTIG | 7.0 | -46.1° | 2.2 | 32.5 | -28.0 |
| Model 3 | AREVGWMAAGLMIGAGACYCVYKLTIG | 7.3 | -22.9° | 4.1 | 38.8 | -26.4 |
| Model 4 | AREVGWMAAGLMIGAGACYCVYKLTIG | 6.8 | -52.9° | 1.9 | 45.2 | -20.8 |
| Model 5 | AREVGWMAAGLMIGAGACYCVYKLTIG | 7.1 | -55.0° | 2.4 | 48.0 | -11.1 |
| Model 6 | AREVGWMAAGLMIGAGACYCVYKLTIG | 7.0 | -49.9° | 2.8 | 47.2 | -7.8 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 10, MET, HA | A, 9, TRP, O | 3.02Å |
| B, 13, GLY, HA1 | A, 10, MET, O | 2.59Å |
| B, 14, LEU, HA | A, 13, GLY, O | 2.51Å |
| B, 17, GLY, HA1 | A, 14, LEU, O | 3.27Å |
| A, 10, MET, HA | B, 9, TRP, O | 3.01Å |
| A, 13, GLY, HA1 | B, 10, MET, O | 2.59Å |
| A, 14, LEU, HA | B, 13, GLY, O | 2.51Å |
| A, 17, GLY, HA1 | B, 14, LEU, O | 3.27Å |
