UniProt data
UniProt name: F1711_HUMAN (Q5VUB5)
Gene name: FAM171A1; Synonyms=C10orf38
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Transmembrane domains:
- 304-324, 21 AA, Helical. {ECO:0000255}.
Sequence: 890 AA
10 20 30 40 50 60
MSRSATLLLC LLGCHVWKAV TKTLREPGAG AQEVTLKVHI SDASTHQPVA DALIEIFTNQ
70 80 90 100 110 120
ASIASGTSGT DGVAFIKFQY KLGSQLIVTA SKHAYVPNSA PWKPIRLPVF SSLSLGLLPE
130 140 150 160 170 180
RSATLMVYED VVQIVSGFQG ARPQPRVHFQ RRALRLPENT SYSDLTAFLT AASSPSEVDS
190 200 210 220 230 240
FPYLRGLDGN GTGNSTRHDL TPVTAVSVHL LSSNGTPVLV DGPIYVTVPL ATQSSLRHNA
250 260 270 280 290 300
YVAAWRFDQK LGTWLKSGLG LVHQEGSQLT WTYIAPQLGY WVAAMSPPIP GPVVTQDITT
310 320 330 340 350 360
YHTVFLLAIL GGMAFILLVL LCLLLYYCRR KCLKPRQHHR KLQLPAGLES SKRDQSTSMS
370 380 390 400 410 420
HINLLFSRRA SEFPGPLSVT SHGRPEAPGT KELMSGVHLE MMSPGGEGDL HTPMLKLSYS
430 440 450 460 470 480
TSQEFSSREE LLSCKEEDKS QISFDNLTPS GTLGKDYHKS VEVFPLKARK SMEREGYESS
490 500 510 520 530 540
GNDDYRGSYN TVLSQPLFEK QDREGPASTG SKLTIQEHLY PAPSSPEKEQ LLDRRPTECM
550 560 570 580 590 600
MSRSVDHLER PTSFPRPGQL ICCSSVDQVN DSVYRKVLPA LVIPAHYMKL PGDHSYVSQP
610 620 630 640 650 660
LVVPADQQLE IERLQAELSN PHAGIFPHPS SQIQPQPLSS QAISQQHLQD AGTREWSPQN
670 680 690 700 710 720
ASMSESLSIP ASLNDAALAQ MNSEVQLLTE KALMELGGGK PLPHPRAWFV SLDGRSNAHV
730 740 750 760 770 780
RHSYIDLQRA GRNGSNDASL DSGVDMNEPK SARKGRGDAL SLQQNYPPVQ EHQQKEPRAP
790 800 810 820 830 840
DSTAYTQLVY LDDVEQSGSE CGTTVCTPED SALRCLLEGS SRRSGGQLPS LQEETTRRTA
850 860 870 880
DAPSEPAASP HQRRSAHEEE EDDDDDDQGE DKKSPWQKRE ERPLMAFNIK
CATM prediction
The sequence of F1711_HUMAN returned 2 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 310 320 + | + | + |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | YHTVFLLAILGGMAFILLVLLCLLLYY | 7.3 | -54.1° | 3.6 | 48.8 | -19.4 |
| Model 2 | YHTVFLLAILGGMAFILLVLLCLLLYY | 6.9 | -52.1° | 1.8 | 35.2 | -6.5 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 309, ILE, HA | A, 308, ALA, O | 3.28Å |
| B, 312, GLY, HA1 | A, 309, ILE, O | 3.36Å |
| A, 309, ILE, HA | B, 308, ALA, O | 3.28Å |
| A, 312, GLY, HA1 | B, 309, ILE, O | 3.36Å |
