PDZK1-interacting protein 1

UniProt data

UniProt name: PDZ1I_HUMAN (Q13113)

Gene name: PDZK1IP1; Synonyms=MAP17

Organism: Homo sapiens (Human).

Function: May play an important role in tumor biology.

Subcellular location: Membrane; Single-pass membrane protein.

Transmembrane domains:

  1. 30-50, 21 AA, Helical. {ECO:0000255}.

Sequence: 114 AA

10 20 30 40 50 60 MSALSLLILG LLTAVPPASC QQGLGNLQPW MQGLIAVAVF LVLVAIAFAV NHFWCQEEPE 70 80 90 100 110 PAHMILTVGN KADGVLVGTD GRYSSMAASF RSSEHENAYE NVPEEEGKVR STPM

CATM prediction

The sequence of PDZ1I_HUMAN returned 1 potential models

The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.

# Sequence and interface d θ Z' ω' Score
     30        40        50  
   |    +    |    +    |   		 (Å) (°) (Å) (°)  
Model 1 LQAWMQGLIAVAVFLVLVAIAFAVNHF 7.4 -54.1° 2.8 51.1 -14.0
Prolines* LQPWMQGLIAVAVFLVLVAIAFAVNHF          

* Note: this sequence contains Pro residues. CATM substituted them with Ala during the modeling. The positions are marked.

Click on the model number to visualize its details below.

MODEL 1 DETAILS

Precited structure:


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Download model 1 structure: PDB, PyMOL session

List of hydrogen bonds:

Donor Acceptor Distance
B, 33, GLY, HA1 A, 30, TRP, O 3.47Å
B, 30, TRP, HE1 A, 32, GLN, OE1 2.25Å
A, 33, GLY, HA1 B, 30, TRP, O 3.47Å
A, 30, TRP, HE1 B, 32, GLN, OE1 2.25Å