UniProt data
UniProt name: OLR1_HUMAN (P78380)
Gene name: OLR1; Synonyms=CLEC8A, LOX1
Organism: Homo sapiens (Human).
Function: Receptor that mediates the recognition, internalization and degradation of oxidatively modified low density lipoprotein (oxLDL) by vascular endothelial cells. OxLDL is a marker of atherosclerosis that induces vascular endothelial cell activation and dysfunction, resulting in pro-inflammatory responses, pro- oxidative conditions and apoptosis. Its association with oxLDL induces the activation of NF-kappa-B through an increased production of intracellular reactive oxygen and a variety of pro- atherogenic cellular responses including a reduction of nitric oxide (NO) release, monocyte adhesion and apoptosis. In addition to binding oxLDL, it acts as a receptor for the HSP70 protein involved in antigen cross-presentation to naive T-cells in dendritic cells, thereby participating in cell-mediated antigen cross-presentation. Also involved in inflammatory process, by acting as a leukocyte-adhesion molecule at the vascular interface in endotoxin-induced inflammation. Also acts as a receptor for advanced glycation end (AGE) products, activated platelets, monocytes, apoptotic cells and both Gram-negative and Gram- positive bacteria. {ECO:0000269|PubMed:11821063, ECO:0000269|PubMed:12354387, ECO:0000269|PubMed:9052782}.
Subcellular location: Cell membrane; Lipid-anchor. Cell membrane; Single-pass type II membrane protein. Membrane raft. Secreted. Note=A secreted form also exists. Localization to membrane rafts requires palmitoylation.
Transmembrane domains:
- 37-57, 21 AA, Helical; Signal-anchor for type II membrane protein. {ECO:0000255}.
Sequence: 273 AA
CATM prediction
The sequence of OLR1_HUMAN returned 2 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 40 50 6 + | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | WWCLAAATLGVLCLGLVVTIMVLGMQL | 7.4 | -50.1° | 2.8 | 47.2 | -21.2 |
| Model 2 | WWCLAAATLGVLCLGLVVTIMVLGMQL | 7.0 | -54.0° | 4.8 | 41.0 | -9.0 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 45, LEU, HA | A, 44, VAL, O | 3.40Å |
| B, 48, GLY, HA1 | A, 45, LEU, O | 3.36Å |
| B, 49, LEU, HA | A, 52, THR, OG1 | 2.75Å |
| A, 45, LEU, HA | B, 44, VAL, O | 3.40Å |
| A, 48, GLY, HA1 | B, 45, LEU, O | 3.36Å |
| A, 49, LEU, HA | B, 52, THR, OG1 | 2.75Å |


