Activator of apoptosis harakiri

UniProt data

UniProt name: HRK_HUMAN (O00198)

Gene name: HRK; Synonyms=BID3

Organism: Homo sapiens (Human).

Function: Promotes apoptosis. {ECO:0000269|PubMed:15031724, ECO:0000269|PubMed:9130713}.

Subcellular location: Membrane; Single-pass membrane protein. Mitochondrion.

Transmembrane domains:

  1. 69-87, 19 AA, Helical. {ECO:0000255}.

Sequence: 91 AA

10 20 30 40 50 60 MCPCPLHRGR GPPAVCACSA GRLGLRSSAA QLTAARLKAL GDELHQRTMW RRRARSRRAP 70 80 90 APGALPTYWP WLCAAAQVAA LAAWLLGRRN L

CATM prediction

The sequence of HRK_HUMAN returned 1 potential models

The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.

# Sequence and interface d θ Z' ω' Score
      70        80        9
    |    +    |    +    |
(Å) (°) (Å) (°)  
ATYWAWLCAAAQVAALAAWLLGRRN 7.2 -37.0° 2.3 35.9 -5.0
PTYWPWLCAAAQVAALAAWLLGRRN          

* Note: this sequence contains Pro residues. CATM substituted them with Ala during the modeling. The positions are marked.

Click on the model number to visualize its details below.

MODEL 1 DETAILS

Precited structure:


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Download model 1 structure: PDB, PyMOL session

List of hydrogen bonds:

Donor Acceptor Distance
B, 80, ALA, HA A, 79, ALA, O 3.46Å
B, 84, TRP, HA A, 83, ALA, O 3.38Å
A, 80, ALA, HA B, 79, ALA, O 3.46Å
A, 84, TRP, HA B, 83, ALA, O 3.38Å