UniProt data
UniProt name: CC080_HUMAN (F5H4A9)
Gene name: C3orf80
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 82-102, 21 AA, Helical. {ECO:0000255}.
Sequence: 247 AA
10 20 30 40 50 60
MWGPGVTAEG LSVAPAPPPL LPLLLLLALA LVAPSRGGGG CAELACGERE RCCDATNATA
70 80 90 100 110 120
VRCCKLPLHA FLDNVGWFVR KLSGLLILLV LFAIGYFLQR IICPSPRRYP RGQARPGQRP
130 140 150 160 170 180
GPPGGAGPLG GAGPPDDDDD SPALLRDEAA AGSQDSLLDS GGGGRGRGGG GRSDPSCASE
190 200 210 220 230 240
HEMRVVSPVF LQLPSYEEVK YLPTYEESMR LQQLSPGEVV LPVSVLGRPR GGVAAEPDGG
EGRYPLI
CATM prediction
The sequence of CC080_HUMAN returned 1 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 80 90 100 | + | + | + |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | VRKLSGLLILLVLFAIGYFLQRIICAS | 7.2 | -55.0° | 0.9 | 49.9 | -17.0 |
| Prolines* | VRKLSGLLILLVLFAIGYFLQRIICPS |
* Note: this sequence contains Pro residues. CATM substituted them with Ala during the modeling. The positions are marked.
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 95, GLY, HA1 | A, 92, PHE, O | 3.39Å |
| B, 96, TYR, HA | A, 95, GLY, O | 3.45Å |
| A, 95, GLY, HA1 | B, 92, PHE, O | 3.39Å |
| A, 96, TYR, HA | B, 95, GLY, O | 3.45Å |