UniProt data
UniProt name: SMIM1_HUMAN (B2RUZ4)
Gene name: SMIM1
Organism: Homo sapiens (Human).
Function: Regulator of red blood cells formation. {ECO:0000250}.
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 47-67, 21 AA, Helical. {ECO:0000255}.
Sequence: 78 AA
10 20 30 40 50 60
MQPQESHVHY SRWEDGSRDG VSLGAVSSTE EASRCRRISQ RLCTGKLGIA MKVLGGVALF
70
WIIFILGYLT GYYVHKCK
CATM prediction
The sequence of SMIM1_HUMAN returned 2 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 50 60 7 + | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | TGKLGIAMKVLGGVALFWIIFILGYLT | 7.2 | -54.9° | 4.2 | 37.8 | -19.9 |
| Model 2 | TGKLGIAMKVLGGVALFWIIFILGYLT | 7.3 | -46.0° | 3.6 | 37.0 | -17.0 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 52, LYS, HA | A, 51, MET, O | 3.04Å |
| B, 55, GLY, HA1 | A, 52, LYS, O | 3.22Å |
| A, 52, LYS, HA | B, 51, MET, O | 3.04Å |
| A, 55, GLY, HA1 | B, 52, LYS, O | 3.22Å |
