Small integral membrane protein 9

UniProt data

UniProt name: SMIM9_HUMAN (A6NGZ8)

Gene name: SMIM9; Synonyms=CXorf68

Organism: Homo sapiens (Human).

Function:

Subcellular location: Cell membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.

Transmembrane domains:

  1. 74-94, 21 AA, Helical. {ECO:0000255}.

Sequence: 99 AA

10 20 30 40 50 60 MEPQKLLIIG FLLCSLTCLL LETVASSPLP LSALGIQEKT GSKPRSGGNH RSWLNNFRDY 70 80 90 LWQLIKSALP PAAIVAFLLT SALMGILCCF TILVVDPVH

CATM prediction

The sequence of SMIM9_HUMAN returned 1 potential models

The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.

# Sequence and interface d θ Z' ω' Score
           80        90      
    +    |    +    |    +  
(Å) (°) (Å) (°)  
AAAIVAFLLTSALMGILCCFTILVVDA 7.2 -46.0° 3.6 37.2 -28.0
PAAIVAFLLTSALMGILCCFTILVVDP          

* Note: this sequence contains Pro residues. CATM substituted them with Ala during the modeling. The positions are marked.

Click on the model number to visualize its details below.

MODEL 1 DETAILS

Precited structure:


Click on the image to enlarge

Download model 1 structure: PDB, PyMOL session

List of hydrogen bonds:

Donor Acceptor Distance
B, 78, LEU, HA A, 81, SER, OG 3.18Å
B, 82, ALA, HA A, 81, SER, O 3.28Å
B, 85, GLY, HA1 A, 82, ALA, O 3.36Å
A, 78, LEU, HA B, 81, SER, OG 3.18Å
A, 82, ALA, HA B, 81, SER, O 3.28Å
A, 85, GLY, HA1 B, 82, ALA, O 3.36Å