UniProt data
UniProt name: YG055_HUMAN (A4D0T7)
Gene name: LINC00998
Organism: Homo sapiens (Human).
Function:
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Transmembrane domains:
- 30-50, 21 AA, Helical. {ECO:0000255}.
Sequence: 59 AA
10 20 30 40 50
MTSVSTQLSL VLMSLLLVLP VVEAVEAGDA IALLLGVVLS ITGICACLGV YARKRNGQM
CATM prediction
The sequence of YG055_HUMAN returned 3 potential models
The positions at the dimer's interface are highlighted in yellow. The position at the crossing point is highlighted in orange.
| # | Sequence and interface | d | θ | Z' | ω' | Score |
|---|---|---|---|---|---|---|
| 30 40 50 | + | + | |
(Å) | (°) | (Å) | (°) | ||
| Model 1 | AGDAIALLLGVVLSITGICACLGVYAR | 7.4 | -41.6° | 2.8 | 50.1 | -15.7 |
| Model 2 | AGDAIALLLGVVLSITGICACLGVYAR | 7.3 | -36.0° | 3.6 | 36.1 | -10.7 |
| Model 3 | AGDAIALLLGVVLSITGICACLGVYAR | 7.4 | -22.0° | 3.1 | 40.0 | -1.5 |
Click on the model number to visualize its details below.
MODEL 1 DETAILS
Precited structure:
Click on the image to enlarge
Download model 1 structure: PDB, PyMOL session
List of hydrogen bonds:
| Donor | Acceptor | Distance |
|---|---|---|
| B, 33, LEU, HA | A, 32, ALA, O | 3.22Å |
| B, 36, GLY, HA1 | A, 33, LEU, O | 3.46Å |
| B, 37, VAL, HA | A, 40, SER, OG | 2.80Å |
| A, 33, LEU, HA | B, 32, ALA, O | 3.22Å |
| A, 36, GLY, HA1 | B, 33, LEU, O | 3.46Å |
| A, 37, VAL, HA | B, 40, SER, OG | 2.80Å |
